Domain ID e4ktyB5

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  • A: a+b complex topology
  • X: Cysteine proteinases-like
  • H: Cysteine proteinases
  • T: Cysteine proteinases
  • F: Transglut_core
UID: 001163678
Type: Automatic domain
Parent: e2f4mA1
Range: B:191-505
Ligands: CA GOL SO4
PDB: 4kty
PDB Description: COAGULATION FACTOR XIII A CHAIN
UniProt: P00488
Hsap BLAST neighbor: P00488
Species: Homo sapiens

Structure of domain e4ktyB5

Domains in the same chain:

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e4ktyB1 B:15-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyB5 B:191-505 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4ktyB6 B:515-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyB7 B:628-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4ktyA1 A:15-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyA5 A:191-505 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4ktyA6 A:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyA7 A:628-725 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyB1 B:15-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyB5 B:191-505 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e4ktyB6 B:515-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ktyB7 B:628-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4ktyB5 of H-group "Cysteine proteinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ktyA1 B:X,Y,Z-1->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4ktyA7 B:X,Y,Z-1->A:x,y,z Immunoglobulin-related Interaction Interface Pymol