Domain ID e4kv8B1

Download files:
  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RVT_thumb
UID: 001086532
Type: Automatic domain
Parent: e2zd1B1
Range: B:235-308
Ligands: MLA
PDB: 4kv8
PDB Description: HIV Reverse transcriptase P51
UniProt: P04585
Species:

Structure of domain e4kv8B1

Domains in the same chain:

Download Pymol

e4kv8B2 B:5-234 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4kv8B1 B:235-308 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4kv8B3 B:309-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e4kv8A12 A:1-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4kv8A11 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4kv8A9 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e4kv8A10 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4kv8B2 B:5-234 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4kv8B1 B:235-308 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4kv8B3 B:309-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e4kv8B1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kv8A10 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e4kv8A12 B:x,y,z->A:-X+3/2,Y-1/2,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4kv8A10 B:x,y,z->A:-X+1,Y,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol