Domain ID e4l5yF1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 001296860
Type: Automatic domain
Parent: e3pnpA1
Range: F:3-291
Ligands: PO4
PDB: 4l5y
PDB Description: S-methyl-5'-thioadenosine phosphorylase
UniProt: I0B503
Hsap BLAST neighbor: Q13126
Species: Schistosoma mansoni

Structure of domain e4l5yF1

Structural contacts of domain e4l5yF1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4l5yE1 F:x,y,z->E:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4l5yD1 F:x,y,z->D:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4l5yB1 F:X-1,Y,Z->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4l5yF1 F:x,y,z->F:-X+2,Y-1/2,-Z+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4l5yF1 F:-X+2,Y-1/2,-Z+1->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e4l5yE1 F:-X+2,Y-1/2,-Z+1->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol