ECOD: domain e4l6vd1

Domain ID e4l6vd1

A: a+b two layers
X: Photosystem I subunit PsaD
H: Photosystem I subunit PsaD
T: Photosystem I subunit PsaD
F: PsaD

UID:	001281496
Type:	Automatic domain
Parent:	e1jb0D1
Range:	d:3-140
PDB:	4l6v
PDB Description:	Photosystem I subunit II
UniProt:	P19569
Species:	Synechocystis sp. PCC 6803

Domains in the same chain:

Download Pymol

e4l6vd1	d:3-140	Photosystem I subunit PsaD	Photosystem I subunit PsaD	Photosystem I subunit PsaD

Domains in the same PDB:

Structural contacts of domain e4l6vd1 of H-group "Photosystem I subunit PsaD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4l6vc1	d:x,y,z->c:X,Y,Z	4Fe-4S ferredoxin	Interaction Interface Pymol
e4l6va1	d:x,y,z->a:X,Y,Z	Bacterial photosystem II reaction centre L and M subunits-like	Interaction Interface Pymol
e4l6va2	d:x,y,z->a:X,Y,Z	Photosystem II antenna protein-like	Interaction Interface Pymol
e4l6vb2	d:x,y,z->b:X,Y,Z	Bacterial photosystem II reaction centre L and M subunits-like	Interaction Interface Pymol
e4l6vb1	d:x,y,z->b:X,Y,Z	Photosystem II antenna protein-like	Interaction Interface Pymol
e4l6vl1	d:X,Y,Z->l:x,y,z	Photosystem I reaction center subunit XI, PsaL	Interaction Interface Pymol
e4l6ve1	d:X,Y,Z->e:x,y,z	SH3	Interaction Interface Pymol
e4l6vk1	d:-X,Y-1/2,-Z+2->k:x,y,z	Photosystem I reaction center subunit X, PsaK	Interaction Interface Pymol

e4l6v01	0:48-127	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK
e4l6v12	1:13-419	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6v11	1:420-751	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6v21	2:3-402	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6v22	2:403-730	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6v31	3:2-81	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4l6v41	4:3-140	Photosystem I subunit PsaD	Photosystem I subunit PsaD	Photosystem I subunit PsaD
e4l6v51	5:2-69	SH3	SH3	SH3
e4l6v62	6:1-40	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ
e4l6v61	6:33-125	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF
e4l6v71	7:1-31	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM
e4l6v81	8:7-157	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL
e4l6v91	9:1-38	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI
e4l6va2	a:13-419	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6va1	a:420-751	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6vA2	A:13-419	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6vA1	A:420-751	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6vb1	b:3-402	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6vb2	b:403-730	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6vB1	B:3-402	Photosystem II antenna protein-like	Photosystem II antenna protein-like	Photosystem II antenna protein-like
e4l6vB2	B:403-730	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like	Bacterial photosystem II reaction centre L and M subunits-like
e4l6vc1	c:2-81	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4l6vC1	C:2-81	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e4l6vd1	d:3-140	Photosystem I subunit PsaD	Photosystem I subunit PsaD	Photosystem I subunit PsaD
e4l6vD1	D:3-140	Photosystem I subunit PsaD	Photosystem I subunit PsaD	Photosystem I subunit PsaD
e4l6ve1	e:2-69	SH3	SH3	SH3
e4l6vE1	E:2-69	SH3	SH3	SH3
e4l6vf2	f:1-40	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ
e4l6vf1	f:33-125	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF
e4l6vF1	F:1-40	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ	Subunit IX of photosystem I reaction centre, PsaJ
e4l6vF2	F:33-125	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF	Subunit III of photosystem I reaction centre, PsaF
e4l6vi1	i:1-38	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI
e4l6vI1	I:1-38	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI	Subunit VIII of photosystem I reaction centre, PsaI
e4l6vk1	k:48-127	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK
e4l6vK1	K:48-127	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK	Photosystem I reaction center subunit X, PsaK
e4l6vl1	l:7-157	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL
e4l6vL1	L:7-157	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL
e4l6vm1	m:1-31	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM
e4l6vM1	M:1-31	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM	Subunit XII of photosystem I reaction centre, PsaM