ECOD: domain e4ldvA1

Domain ID e4ldvA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Type II restriction endonuclease effector domain
F: B3

UID:	001281513
Type:	Automatic domain
Parent:	e1widA1
Range:	A:119-226
Ligands:	CL FMT IOD
PDB:	4ldv
PDB Description:	Auxin response factor 1
UniProt:	Q8L7G0
Species:	Arabidopsis thaliana

Domains in the same chain:

Download Pymol

e4ldvA2	A:16-118,A:227-281	SH3	Auxin response factor dimerization domain and ancillary domain	Auxin response factor dimerization domain and ancillary domain
e4ldvA1	A:119-226	cradle loop barrel	RIFT-related	Type II restriction endonuclease effector domain
e4ldvA3	A:282-356	SH3	Auxin response factor dimerization domain and ancillary domain	Auxin response factor dimerization domain and ancillary domain

Domains in the same PDB:

e4ldvA2	A:16-118,A:227-281	SH3	Auxin response factor dimerization domain and ancillary domain	Auxin response factor dimerization domain and ancillary domain
e4ldvA1	A:119-226	cradle loop barrel	RIFT-related	Type II restriction endonuclease effector domain
e4ldvA3	A:282-356	SH3	Auxin response factor dimerization domain and ancillary domain	Auxin response factor dimerization domain and ancillary domain

Structural contacts of domain e4ldvA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ldvA2	A:-X+1/2,Y-1/2,-Z-1/2->A:x,y,z	Auxin response factor dimerization domain and ancillary domain	Interaction Interface Pymol
e4ldvA3	A:x,y,z->A:X,-Y+1,-Z	Auxin response factor dimerization domain and ancillary domain	Interaction Interface Pymol
e4ldvA3	A:X,-Y+1,-Z->A:x,y,z	Auxin response factor dimerization domain and ancillary domain	Interaction Interface Pymol
e4ldvA1	A:x,y,z->A:-X+1,Y,-Z-1/2	RIFT-related	Interaction Interface Pymol
e4ldvA1	A:-X+1,Y,-Z-1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol
e4ldvA2	A:X-1/2,Y-1/2,Z->A:x,y,z	Auxin response factor dimerization domain and ancillary domain	Interaction Interface Pymol