ECOD: domain e4lmlD1

Domain ID e4lmlD1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Nicotinic receptor ligand binding domain-like
T: Nicotinic receptor ligand binding domain-like
F: Neur_chan_LBD

UID:	001111793
Type:	Automatic domain
Parent:	e1uw6A1
Range:	D:7-194
PDB:	4lml
PDB Description:	PROTON-GATED ION CHANNEL
UniProt:	Q7NDN8
Hsap BLAST neighbor:	Q9UN88
Species:	Gloeobacter violaceus

Domains in the same chain:

Download Pymol

e4lmlD1	D:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlD2	D:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e4lmlA1	A:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlA2	A:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore
e4lmlB1	B:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlB2	B:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore
e4lmlC1	C:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlC2	C:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore
e4lmlD1	D:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlD2	D:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore
e4lmlE1	E:7-194	Immunoglobulin-like beta-sandwich	Nicotinic receptor ligand binding domain-like	Nicotinic receptor ligand binding domain-like
e4lmlE2	E:193-316	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore	Neurotransmitter-gated ion-channel transmembrane pore

Structural contacts of domain e4lmlD1 of H-group "Nicotinic receptor ligand binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4lmlE1	D:X,Y,Z->E:x,y,z	Nicotinic receptor ligand binding domain-like	Interaction Interface Pymol
e4lmlA1	D:x,y,z->A:X,Y,Z	Nicotinic receptor ligand binding domain-like	Interaction Interface Pymol
e4lmlA2	D:x,y,z->A:X,Y,Z	Neurotransmitter-gated ion-channel transmembrane pore	Interaction Interface Pymol
e4lmlB1	D:x,y,z->B:-X,Y-1/2,-Z-1/2	Nicotinic receptor ligand binding domain-like	Interaction Interface Pymol
e4lmlC2	D:x,y,z->C:-X-1/2,-Y+1,Z-1/2	Neurotransmitter-gated ion-channel transmembrane pore	Interaction Interface Pymol