ECOD: domain e4lrvD1

Domain ID e4lrvD1

A: alpha arrays
X: HTH
H: HTH
T: Ribbon-helix-helix
F: DndE

UID:	001102648
Type:	Automatic domain
Parent:	e4lrvA1
Range:	D:2-108
PDB:	4lrv
PDB Description:	DNA SULFUR MODIFICATION PROTEIN DNDE
UniProt:	B3HI59
Species:

Domain
In chain context
In PDB context

Structure of domain e4lrvD1

Domains in the same chain:

Download Pymol

e4lrvD1	D:2-108	HTH	HTH	Ribbon-helix-helix

Domains in the same PDB:

e4lrvA1	A:2-108	HTH	HTH	Ribbon-helix-helix
e4lrvB1	B:3-108	HTH	HTH	Ribbon-helix-helix
e4lrvC1	C:3-107	HTH	HTH	Ribbon-helix-helix
e4lrvD1	D:2-108	HTH	HTH	Ribbon-helix-helix
e4lrvE1	E:3-107	HTH	HTH	Ribbon-helix-helix
e4lrvF1	F:3-106	HTH	HTH	Ribbon-helix-helix
e4lrvG1	G:2-107	HTH	HTH	Ribbon-helix-helix
e4lrvH1	H:2-107	HTH	HTH	Ribbon-helix-helix
e4lrvI1	I:2-107	HTH	HTH	Ribbon-helix-helix
e4lrvJ1	J:3-108	HTH	HTH	Ribbon-helix-helix
e4lrvK1	K:3-109	HTH	HTH	Ribbon-helix-helix
e4lrvL1	L:3-107	HTH	HTH	Ribbon-helix-helix
e4lrvM1	M:3-110	HTH	HTH	Ribbon-helix-helix
e4lrvN1	N:3-108	HTH	HTH	Ribbon-helix-helix
e4lrvO1	O:2-107	HTH	HTH	Ribbon-helix-helix
e4lrvP1	P:2-108	HTH	HTH	Ribbon-helix-helix

Structural contacts of domain e4lrvD1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4lrvG1	D:X,Y,Z->G:x,y,z	HTH	Interaction Interface Pymol
e4lrvF1	D:X,Y,Z->F:x,y,z	HTH	Interaction Interface Pymol
e4lrvB1	D:x,y,z->B:X,Y,Z	HTH	Interaction Interface Pymol
e4lrvK1	D:x,y,z->K:X-1/2,Y+1/2,Z	HTH	Interaction Interface Pymol
e4lrvM1	D:X,Y,Z->M:x,y,z	HTH	Interaction Interface Pymol
e4lrvJ1	D:x,y,z->J:X-1/2,Y+1/2,Z	HTH	Interaction Interface Pymol
e4lrvE1	D:x,y,z->E:X-1/2,Y+1/2,Z	HTH	Interaction Interface Pymol