Domain ID e4lzdA3

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 001144428
Type: Automatic domain
Parent: e2fmpA3
Range: A:289-494
Ligands: CL EDO IMD
PDB: 4lzd
PDB Description: DNA-directed DNA/RNA polymerase mu
UniProt: Q9NP87
Hsap BLAST neighbor: Q9NP87
Species: Homo sapiens

Structure of domain e4lzdA3

Structural contacts of domain e4lzdA3 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4lzdA1 A:x,y,z->A:-Y+3/2,X-1/2,Z+1/4 SAM/DNA-glycosylase Interaction Interface Pymol
e4lzdA3 A:x,y,z->A:-Y+3/2,X-1/2,Z+1/4 Nucleotidyltransferase Interaction Interface Pymol
e4lzdA2 A:-Y+3/2,X-1/2,Z+1/4->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e4lzdA3 A:-Y+3/2,X-1/2,Z+1/4->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e4lzdA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z+3/4 SAM/DNA-glycosylase Interaction Interface Pymol
e4lzdA3 A:x,y,z->A:-Y+1,-X+1,-Z+1/2 Nucleotidyltransferase Interaction Interface Pymol
e4lzdA3 A:-Y+1,-X+1,-Z+1/2->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e4lzdA1 A:-Y+3/2,X-1/2,Z-3/4->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol