ECOD: domain e4m1eD1

Domain ID e4m1eD1

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Peptidyl-tRNA hydrolase-like
T: Peptidyl-tRNA hydrolase-like
F: PNP_UDP_1

UID:	001097005
Type:	Automatic domain
Parent:	e3pnpA1
Range:	D:2-274
Ligands:	6PC ADE SO4
PDB:	4m1e
PDB Description:	PURINE NUCLEOSIDE PHOSPHORYLASE
UniProt:	D5SMY7
Hsap BLAST neighbor:	P00491
Species:

Domains in the same chain:

Download Pymol

e4m1eD1	D:2-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

Structural contacts of domain e4m1eD1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4m1eF1	D:X,Y,Z->F:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eE1	D:X,Y,Z->E:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eC1	D:x,y,z->C:X,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eA1	D:x,y,z->A:X,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eA1	D:x,y,z->A:X-1,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eF1	D:x,y,z->F:X-1,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eE1	D:X,Y-1,Z->E:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e4m1eC1	D:X,Y,Z-1->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol

e4m1eA1	A:3-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e4m1eB1	B:2-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e4m1eC1	C:2-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e4m1eD1	D:2-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e4m1eE1	E:1-273	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e4m1eF1	F:3-274	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like