Domain ID e4m4wB2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DnaB_C
UID: 001382995
Type: Automatic domain
Parent: e2r6aB1
Range: B:183-441
PDB: 4m4w
PDB Description: REPLICATIVE HELICASE
UniProt: Q9X4C9
Species: Geobacillus stearothermophilus

Structure of domain e4m4wB2

Domains in the same chain:

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e4m4wB4 B:15-149,B:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wB2 B:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4m4wA4 A:15-149,A:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wA2 A:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wB4 B:15-149,B:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wB2 B:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wC4 C:15-149,C:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wC2 C:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wD4 D:15-149,D:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wD2 D:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wE4 E:15-149,E:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wE2 E:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wF4 F:15-149,F:183-184 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wF2 F:183-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wG1 G:456-593 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wH1 H:456-593 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wI1 I:456-593 DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related DnaB helicase N-terminal domain-related
e4m4wJ3 J:32-104 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wJ2 J:111-309 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wK5 K:32-105 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wK4 K:112-304 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wL3 L:32-104 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wL2 L:111-309 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wM6 M:32-105 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wM5 M:112-304 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wN2 N:32-104 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wN1 N:111-309 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4m4wO3 O:32-105 N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI N-terminal domain of helicase-loading protein DnaI
e4m4wO1 O:112-304 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4m4wB2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4m4wE2 B:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e4m4wE4 B:X,Y,Z->E:x,y,z DnaB helicase N-terminal domain-related Interaction Interface Pymol
e4m4wA2 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4m4wL3 B:X,Y,Z->L:x,y,z N-terminal domain of helicase-loading protein DnaI Interaction Interface Pymol