ECOD: domain e4m9jA5

Domain ID e4m9jA5

A: a+b three layers
X: Nucleotidyltransferase-like
H: Nucleotidyltransferase
T: Nucleotidyltransferase
F: DNA_pol_B_thumb,DNA_pol_B_palm

UID:	001174279
Type:	Automatic domain
Parent:	e2fmpA3
Range:	A:149-335
Ligands:	CL DUP MG
PDB:	4m9j
PDB Description:	DNA polymerase beta
UniProt:	P06746
Hsap BLAST neighbor:	P06746
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4m9jA5

Domains in the same chain:

Download Pymol

e4m9jA4	A:10-91	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4m9jA6	A:92-148	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4m9jA5	A:149-335	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase

Domains in the same PDB:

e4m9jA4	A:10-91	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4m9jA6	A:92-148	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4m9jA5	A:149-335	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase

Structural contacts of domain e4m9jA5 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4m9jA6	A:x,y,z->A:X-1,Y,Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e4m9jA4	A:x,y,z->A:X-1,Y,Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e4m9jA4	A:-X+1,Y-1/2,-Z->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol