ECOD: domain e4m9sA6

Domain ID e4m9sA6

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: NB-ARC

UID:	001231069
Type:	Automatic domain
Parent:	e2a5yB5
Range:	A:109-291
Ligands:	ATP MG
PDB:	4m9s
PDB Description:	CELL DEATH PROTEIN 4
UniProt:	P30429
Species:	Caenorhabditis elegans

Domains in the same chain:

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e4m9sA2	A:1-108	DEATH domain	DEATH domain	DEATH domain
e4m9sA6	A:109-291	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4m9sA5	A:292-383	Histone-like	Histone-related	AAA+ ATPase lid domain
e4m9sA4	A:384-487,A:521-549	HTH	HTH	winged

Domains in the same PDB:

e4m9sA2	A:1-108	DEATH domain	DEATH domain	DEATH domain
e4m9sA6	A:109-291	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4m9sA5	A:292-383	Histone-like	Histone-related	AAA+ ATPase lid domain
e4m9sA4	A:384-487,A:521-549	HTH	HTH	winged
e4m9sB2	B:1-108	DEATH domain	DEATH domain	DEATH domain
e4m9sB4	B:109-291	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4m9sB5	B:292-386	Histone-like	Histone-related	AAA+ ATPase lid domain
e4m9sB6	B:387-487,B:521-549	HTH	HTH	winged
e4m9sC2	C:1-108	DEATH domain	DEATH domain	DEATH domain
e4m9sC6	C:109-291	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4m9sC5	C:292-383	Histone-like	Histone-related	AAA+ ATPase lid domain
e4m9sC4	C:384-487,C:521-549	HTH	HTH	winged
e4m9sD2	D:1-108	DEATH domain	DEATH domain	DEATH domain
e4m9sD4	D:109-291	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4m9sD5	D:292-386	Histone-like	Histone-related	AAA+ ATPase lid domain
e4m9sD6	D:387-487,D:521-549	HTH	HTH	winged

Structural contacts of domain e4m9sA6 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4m9sB4	A:x,y,z->B:-Y+1/2,X-1/2,Z	P-loop domains-related	Interaction Interface Pymol
e4m9sB5	A:x,y,z->B:-Y+1/2,X-1/2,Z	Histone-related	Interaction Interface Pymol
e4m9sB4	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol