| UID: | 001231078 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2a5yB5 |
| Range: | B:109-291 |
| Ligands: | ATP MG |
| PDB: | 4m9y |
| PDB Description: | CELL DEATH PROTEIN 4 |
| UniProt: | P30429 |
| Species: | Caenorhabditis elegans |
Structure of domain e4m9yB4
Domains in the same chain:
| e4m9yB2 | B:1-108 | DEATH domain | DEATH domain | DEATH domain |
| e4m9yB4 | B:109-291 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4m9yB5 | B:292-386 | Histone-like | Histone-related | AAA+ ATPase lid domain |
| e4m9yB6 | B:387-487,B:521-549 | HTH | HTH | winged |
Domains in the same PDB:
| e4m9yA2 | A:1-108 | DEATH domain | DEATH domain | DEATH domain |
| e4m9yA6 | A:109-291 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4m9yA5 | A:292-383 | Histone-like | Histone-related | AAA+ ATPase lid domain |
| e4m9yA4 | A:384-487,A:521-549 | HTH | HTH | winged |
| e4m9yB2 | B:1-108 | DEATH domain | DEATH domain | DEATH domain |
| e4m9yB4 | B:109-291 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e4m9yB5 | B:292-386 | Histone-like | Histone-related | AAA+ ATPase lid domain |
| e4m9yB6 | B:387-487,B:521-549 | HTH | HTH | winged |
Structural contacts of domain e4m9yB4 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4m9yA2 | B:-Y,X,Z->A:x,y,z | DEATH domain | Interaction Interface Pymol |
| e4m9yA6 | B:-Y,X,Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e4m9yA6 | B:x,y,z->A:X,Y,Z | P-loop domains-related | Interaction Interface Pymol |
| e4m9yA5 | B:x,y,z->A:X,Y,Z | Histone-related | Interaction Interface Pymol |
| e4m9yB4 | B:x,y,z->B:-Y-1/2,-X-1/2,-Z+1/2 | P-loop domains-related | Interaction Interface Pymol |
| e4m9yB2 | B:x,y,z->B:-Y-1/2,-X-1/2,-Z+1/2 | DEATH domain | Interaction Interface Pymol |
| e4m9yB2 | B:-Y-1/2,-X-1/2,-Z+1/2->B:x,y,z | DEATH domain | Interaction Interface Pymol |
| e4m9yB4 | B:-Y-1/2,-X-1/2,-Z+1/2->B:x,y,z | P-loop domains-related | Interaction Interface Pymol |
