ECOD: domain e4madB1

Domain ID e4madB1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Glyco_hydro_35

UID:	001346393
Type:	Automatic domain
Parent:	e1tg7A5
Range:	B:1-337
Ligands:	PG0
PDB:	4mad
PDB Description:	Beta-galactosidase
UniProt:	O31341
Hsap BLAST neighbor:	Q8NCI6
Species:	Bacillus circulans

Domains in the same chain:

Download Pymol

e4madB1	B:1-337	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4madB3	B:338-493	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e4madB2	B:494-586	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like

Domains in the same PDB:

Structural contacts of domain e4madB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4madA3	B:x,y,z->A:X,Y,Z	Concanavalin A-like	Interaction Interface Pymol
e4madA1	B:x,y,z->A:-X,Y,-Z	TIM barrels	Interaction Interface Pymol
e4madA2	B:-X+1/2,Y-1/2,-Z->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e4madA3	B:-X+1/2,Y-1/2,-Z->A:x,y,z	Concanavalin A-like	Interaction Interface Pymol
e4madA2	B:X-1/2,Y-1/2,Z-1->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol

e4madA1	A:1-336	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4madA2	A:337-357,A:492-581	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e4madA3	A:358-491	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e4madB1	B:1-337	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4madB3	B:338-493	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e4madB2	B:494-586	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like