ECOD: domain e4mcdA1

Domain ID e4mcdA1

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: tRNA_m1G_MT

UID:	001102908
Type:	Automatic domain
Parent:	e1ualA1
Range:	A:1-246
Ligands:	22L
PDB:	4mcd
PDB Description:	tRNA (guanine-N(1)-)-methyltransferase
UniProt:	P43912
Species:

Structural contacts of domain e4mcdA1 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4mcdA1	A:x,y,z->A:-X+4/3,-X+Y+2/3,-Z+2/3	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:-X+4/3,-X+Y+2/3,-Z+2/3->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:x,y,z->A:Y-1/3,X+1/3,-Z+1/3	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:Y-1/3,X+1/3,-Z+1/3->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:x,y,z->A:Y,X,-Z+1	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:Y,X,-Z+1->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:x,y,z->A:Y-2/3,X-1/3,-Z+2/3	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:Y-2/3,X-1/3,-Z+2/3->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:x,y,z->A:-Y+2,X-Y+1,Z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:-Y+2,X-Y+1,Z->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:x,y,z->A:-X+Y+2/3,-X+4/3,Z+1/3	alpha/beta knot	Interaction Interface Pymol
e4mcdA1	A:-X+Y+2/3,-X+4/3,Z+1/3->A:x,y,z	alpha/beta knot	Interaction Interface Pymol