Domain ID e4md4B1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001123296
Type: Automatic domain
Parent: e1k5nB1
Range: B:95-190
Ligands: EDO
PDB: 4md4
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-4 BETA CHAIN
UniProt: P13760
Hsap BLAST neighbor: P79483
Species: Homo sapiens

Structure of domain e4md4B1

Structural contacts of domain e4md4B1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4md4A1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4md4A2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4md4B1 B:x,y,z->B:-X+1,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4md4B1 B:-X+1,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4md4B1 B:x,y,z->B:-X,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4md4B1 B:-X,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4md4B1 B:x,y,z->B:X,-Y,-Z Immunoglobulin-related Interaction Interface Pymol
e4md4B1 B:X,-Y,-Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol