Domain ID e4mdiB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001123304
Type: Automatic domain
Parent: e1k5nB1
Range: B:95-190
PDB: 4mdi
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-4 BETA CHAIN
UniProt: P13760
Hsap BLAST neighbor: P79483
Species: Homo sapiens

Structure of domain e4mdiB1

Structural contacts of domain e4mdiB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mdiA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4mdiA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:x,y,z->B:-X+1,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:-X+1,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:x,y,z->B:-X,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:-X,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:x,y,z->B:X,-Y,-Z Immunoglobulin-related Interaction Interface Pymol
e4mdiB1 B:X,-Y,-Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol