Domain ID e4mdjB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001123308
Type: Automatic domain
Parent: e1k5nB1
Range: B:95-192
PDB: 4mdj
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-4 BETA CHAIN
UniProt: P13760
Hsap BLAST neighbor: P79483
Species: Homo sapiens

Structure of domain e4mdjB1

Structural contacts of domain e4mdjB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mdjA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4mdjA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4mdjB1 B:x,y,z->B:-X-1,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4mdjB1 B:-X-1,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4mdjB1 B:x,y,z->B:-X,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e4mdjB1 B:-X,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4mdjB1 B:x,y,z->B:X,-Y,-Z Immunoglobulin-related Interaction Interface Pymol
e4mdjB1 B:X,-Y,-Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4mdjA2 B:X-1,Y,Z->A:x,y,z MHC antigen-recognition domain Interaction Interface Pymol