Domain ID e4mdpA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_1
UID: 001298418
Type: Automatic domain
Parent: e1e4mM1
Range: A:0-476
Ligands: BGC GOL PEG PO4
PDB: 4mdp
PDB Description: Beta-glucosidase
UniProt: O93784
Hsap BLAST neighbor: Q6UWM7
Species:

Structure of domain e4mdpA1

Domains in the same chain:

e4mdpA1 A:0-476 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e4mdpA1 A:0-476 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e4mdpA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mdpA1 A:x,y,z->A:X,X-Y+1,-Z-1/6 TIM barrels Interaction Interface Pymol
e4mdpA1 A:X,X-Y+1,-Z-1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4mdpA1 A:x,y,z->A:X-Y,X,Z-1/6 TIM barrels Interaction Interface Pymol
e4mdpA1 A:X-Y,X,Z-1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4mdpA1 A:x,y,z->A:-Y+1,-X+1,-Z+1/6 TIM barrels Interaction Interface Pymol
e4mdpA1 A:-Y+1,-X+1,-Z+1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e4mdpA1 A:x,y,z->A:X-Y,-Y+1,-Z TIM barrels Interaction Interface Pymol
e4mdpA1 A:X-Y,-Y+1,-Z->A:x,y,z TIM barrels Interaction Interface Pymol