Domain ID e4mfeD2

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: HMGL-like
UID: 001387240
Type: Automatic domain
Parent: e1rqbA3
Range: D:493-837
Ligands: 3PY GOL MG ZN
PDB: 4mfe
PDB Description: PYRUVATE CARBOXYLASE
UniProt: Q2K340
Hsap BLAST neighbor: P11498
Species:

Structure of domain e4mfeD2

Domains in the same chain:

Download Pymol

e4mfeD4 D:471-492,D:1001-1067 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4mfeD2 D:493-837 TIM beta/alpha-barrel TIM barrels TIM barrels
e4mfeD1 D:838-959 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeD3 D:960-1000 RuvA-C post-HMGL domain-like post-HMGL domain-like

Domains in the same PDB:

e4mfeA4 A:471-492,A:1001-1067 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4mfeA2 A:493-837 TIM beta/alpha-barrel TIM barrels TIM barrels
e4mfeA1 A:838-959 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeA3 A:960-1000 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeB4 B:471-492,B:1001-1067 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4mfeB2 B:493-837 TIM beta/alpha-barrel TIM barrels TIM barrels
e4mfeB1 B:838-959 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeB3 B:960-1000 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeC4 C:471-492,C:1001-1067 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4mfeC2 C:493-837 TIM beta/alpha-barrel TIM barrels TIM barrels
e4mfeC1 C:838-959 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeC3 C:960-1000 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeD4 D:471-492,D:1001-1067 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e4mfeD2 D:493-837 TIM beta/alpha-barrel TIM barrels TIM barrels
e4mfeD1 D:838-959 RuvA-C post-HMGL domain-like post-HMGL domain-like
e4mfeD3 D:960-1000 RuvA-C post-HMGL domain-like post-HMGL domain-like

Structural contacts of domain e4mfeD2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mfeC1 D:x,y,z->C:X,Y,Z post-HMGL domain-like Interaction Interface Pymol
e4mfeC2 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e4mfeA2 D:x,y,z->A:-X-1,Y-1/2,-Z+1/2 TIM barrels Interaction Interface Pymol