Domain ID e4mgrB3

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Aminotran_1_2
UID: 001393917
Type: Automatic domain
Parent: e1c7nA2
Range: B:80-361
Ligands: ACT IMD ZN
PDB: 4mgr
PDB Description: HTH-type transcriptional regulatory protein GabR
UniProt: P94426
Hsap BLAST neighbor: Q8N5Z0
Species: Bacillus subtilis

Structure of domain e4mgrB3

Domains in the same chain:

e4mgrB2 B:2-82 HTH HTH winged
e4mgrB3 B:80-361 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e4mgrB4 B:362-472 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e4mgrA2 A:2-82 HTH HTH winged
e4mgrA3 A:80-361 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e4mgrA4 A:362-469 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e4mgrB2 B:2-82 HTH HTH winged
e4mgrB3 B:80-361 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e4mgrB4 B:362-472 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e4mgrC2 C:1-82 HTH HTH winged
e4mgrC3 C:80-361 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e4mgrC4 C:362-475 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e4mgrD2 D:1-82 HTH HTH winged
e4mgrD3 D:80-361 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e4mgrD4 D:362-472 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e4mgrB3 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mgrA4 B:x,y,z->A:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e4mgrA2 B:x,y,z->A:X,Y,Z HTH Interaction Interface Pymol
e4mgrA3 B:x,y,z->A:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e4mgrD3 B:X,Y,Z->D:x,y,z PLP-dependent transferases Interaction Interface Pymol
e4mgrD4 B:x,y,z->D:X-1/2,-Y+1/2,-Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e4mgrC3 B:-X+1/2,-Y,Z-1/2->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e4mgrC3 B:X,Y,Z->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e4mgrA2 B:x,y,z->A:X-1/2,-Y-1/2,-Z HTH Interaction Interface Pymol