Domain ID e4mj1C1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Polyoma_coat
UID: 001112467
Type: Automatic domain
Parent: e1vpsA1
Range: C:43-295
Ligands: CL GOL
PDB: 4mj1
PDB Description: VP1 CAPSID PROTEIN
UniProt: P03088
Species: BK polyomavirus

Structure of domain e4mj1C1

Structural contacts of domain e4mj1C1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mj1B1 C:x,y,z->B:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1D1 C:X,Y,Z->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1A1 C:X-1/2,-Y+1/2,-Z+1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1D1 C:X,Y,Z-1->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1C1 C:x,y,z->C:-X+1,-Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1C1 C:-X+1,-Y,Z->C:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e4mj1D1 C:-X+1,-Y,Z->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol