ECOD: domain e4mjrA3

Domain ID e4mjrA3

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: DNA_pol3_beta_3

UID:	001102999
Type:	Automatic domain
Parent:	e1ok7A3
Range:	A:241-366
Ligands:	0LA PEG
PDB:	4mjr
PDB Description:	DNA POLYMERASE III SUBUNIT BETA
UniProt:	P0A988
Species:

Domain
In chain context
In PDB context

Structure of domain e4mjrA3

Domains in the same chain:

Download Pymol

e4mjrA1	A:1-118	DNA clamp	DNA clamp	DNA clamp
e4mjrA2	A:119-240	DNA clamp	DNA clamp	DNA clamp
e4mjrA3	A:241-366	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e4mjrA1	A:1-118	DNA clamp	DNA clamp	DNA clamp
e4mjrA2	A:119-240	DNA clamp	DNA clamp	DNA clamp
e4mjrA3	A:241-366	DNA clamp	DNA clamp	DNA clamp
e4mjrB1	B:1-102	DNA clamp	DNA clamp	DNA clamp
e4mjrB2	B:103-224	DNA clamp	DNA clamp	DNA clamp
e4mjrB3	B:225-366	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e4mjrA3 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4mjrB1	A:X,Y,Z->B:x,y,z	DNA clamp	Interaction Interface Pymol
e4mjrB2	A:X,Y,Z->B:x,y,z	DNA clamp	Interaction Interface Pymol
e4mjrB2	A:x,y,z->B:X,Y,Z-1	DNA clamp	Interaction Interface Pymol
e4mjrB3	A:x,y,z->B:X,Y,Z-1	DNA clamp	Interaction Interface Pymol
e4mjrB1	A:x,y,z->B:X-1,Y,Z	DNA clamp	Interaction Interface Pymol
e4mjrB3	A:x,y,z->B:X-1,Y,Z	DNA clamp	Interaction Interface Pymol
e4mjrB3	A:x,y,z->B:X-1,Y,Z-1	DNA clamp	Interaction Interface Pymol
e4mjrB2	A:x,y,z->B:X-1,Y,Z-1	DNA clamp	Interaction Interface Pymol
e4mjrA1	A:X,Y-1,Z+1->A:x,y,z	DNA clamp	Interaction Interface Pymol
e4mjrA3	A:x,y,z->A:X-1,Y,Z	DNA clamp	Interaction Interface Pymol
e4mjrA3	A:X-1,Y,Z->A:x,y,z	DNA clamp	Interaction Interface Pymol