Domain ID e4mkbA2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_3
UID: 001107320
Type: Automatic domain
Parent: e1gx5A2
Range: A:1-347
Ligands: 28V
PDB: 4mkb
PDB Description: RNA-DIRECTED RNA POLYMERASE
UniProt: P26663
Species:

Structure of domain e4mkbA2

Structural contacts of domain e4mkbA2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mkbB1 A:x,y,z->B:X-1,Y,Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4mkbB2 A:x,y,z->B:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mkbB1 A:X,Y,Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4mkbB2 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mkbB2 A:x,y,z->B:-X+1/2,-Y,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mkbA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mkbA2 A:X-1/2,-Y+1/2,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mkbA1 A:x,y,z->A:-X-1/2,-Y,Z-1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4mkbB1 A:x,y,z->B:X-1/2,-Y-1/2,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4mkbB2 A:x,y,z->B:X-1/2,-Y-1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol