Domain ID e4mmxB5

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  • A: few secondary structure elements
  • X: EGF-like
  • H: EGF-related
  • T: EGF/Laminin
  • F: EGF_2
UID: 001634546
Type: Automatic domain
Parent: e2dduA2
Range: B:525-562
Ligands: NAG
PDB: 4mmx
PDB Description: Integrin beta-3
UniProt: P05106
Hsap BLAST neighbor: P05106
Species: Homo sapiens

Structure of domain e4mmxB5

Domains in the same chain:

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e4mmxB3 B:1-58 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e4mmxB8 B:59-106,B:355-434 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmxB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e4mmxB6 B:435-478 EGF-like EGF-related EGF/Laminin
e4mmxB7 B:479-524 EGF-like EGF-related EGF/Laminin
e4mmxB5 B:525-562 EGF-like EGF-related EGF/Laminin
e4mmxB4 B:563-605 EGF-like EGF-related EGF/Laminin
e4mmxB2 B:606-690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain

Domains in the same PDB:

e4mmxA6 A:1-439 beta-propeller-like beta-propeller 7-bladed
e4mmxA4 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmxA1 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmxA3 A:738-835,A:868-956 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmxB3 B:1-58 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e4mmxB8 B:59-106,B:355-434 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmxB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e4mmxB6 B:435-478 EGF-like EGF-related EGF/Laminin
e4mmxB7 B:479-524 EGF-like EGF-related EGF/Laminin
e4mmxB5 B:525-562 EGF-like EGF-related EGF/Laminin
e4mmxB4 B:563-605 EGF-like EGF-related EGF/Laminin
e4mmxB2 B:606-690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain
e4mmxC1 C:1417-1509 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4mmxB5 of H-group "EGF-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mmxA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4mmxA6 B:x,y,z->A:X,Y,Z beta-propeller Interaction Interface Pymol