Domain ID e4mmyB5

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  • A: few secondary structure elements
  • X: EGF-like
  • H: EGF-related
  • T: EGF/Laminin
  • F: EGF_2
UID: 001578741
Type: Automatic domain
Parent: e2dduA2
Range: B:525-562
Ligands: NAG
PDB: 4mmy
PDB Description: Integrin beta-3
UniProt: P05106
Hsap BLAST neighbor: P05106
Species: Homo sapiens

Structure of domain e4mmyB5

Domains in the same chain:

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e4mmyB3 B:1-58 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e4mmyB8 B:59-106,B:355-434 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmyB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e4mmyB6 B:435-477 EGF-like EGF-related EGF/Laminin
e4mmyB7 B:478-524 EGF-like EGF-related EGF/Laminin
e4mmyB5 B:525-562 EGF-like EGF-related EGF/Laminin
e4mmyB4 B:563-605 EGF-like EGF-related EGF/Laminin
e4mmyB2 B:606-690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain

Domains in the same PDB:

e4mmyA4 A:1-439 beta-propeller-like beta-propeller 7-bladed
e4mmyA2 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmyA3 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmyA1 A:738-835,A:868-956 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmyB3 B:1-58 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e4mmyB8 B:59-106,B:355-434 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmyB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e4mmyB6 B:435-477 EGF-like EGF-related EGF/Laminin
e4mmyB7 B:478-524 EGF-like EGF-related EGF/Laminin
e4mmyB5 B:525-562 EGF-like EGF-related EGF/Laminin
e4mmyB4 B:563-605 EGF-like EGF-related EGF/Laminin
e4mmyB2 B:606-690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain

Structural contacts of domain e4mmyB5 of H-group "EGF-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mmyA3 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4mmyA4 B:x,y,z->A:X,Y,Z beta-propeller Interaction Interface Pymol