Domain ID e4mmzA5

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Integrin_A_Ig_1
UID: 001397137
Type: Automatic domain
Parent: e1jv2A1
Range: A:439-598
Ligands: MN NA NAG
PDB: 4mmz
PDB Description: Integrin alpha-V
UniProt: P06756
Hsap BLAST neighbor: P06756
Species: Homo sapiens

Structure of domain e4mmzA5

Domains in the same chain:

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e4mmzA3 A:1-439 beta-propeller-like beta-propeller 7-bladed
e4mmzA5 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzA6 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzA4 A:738-835,A:870-954 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4mmzA3 A:1-439 beta-propeller-like beta-propeller 7-bladed
e4mmzA5 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzA6 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzA4 A:738-835,A:870-954 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzB3 B:1-57 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e4mmzB8 B:58-106,B:355-441 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4mmzB1 B:107-354 HAD domain-like HAD domain-related vWA-like
e4mmzB6 B:435-478 EGF-like EGF-related EGF/Laminin
e4mmzB7 B:479-524 EGF-like EGF-related EGF/Laminin
e4mmzB5 B:525-562 EGF-like EGF-related EGF/Laminin
e4mmzB4 B:563-605 EGF-like EGF-related EGF/Laminin
e4mmzB2 B:606-690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain
e4mmzC1 C:1417-1507 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4mmzA5 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mmzB7 A:X,Y,Z->B:x,y,z EGF-related Interaction Interface Pymol
e4mmzB6 A:X,Y,Z->B:x,y,z EGF-related Interaction Interface Pymol
e4mmzA3 A:x,y,z->A:Y-1,X,-Z beta-propeller Interaction Interface Pymol
e4mmzB7 A:Y-1,X,-Z->B:x,y,z EGF-related Interaction Interface Pymol
e4mmzB3 A:Y-1,X,-Z->B:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol