ECOD: domain e4msvB6

Domain ID e4msvB6

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: TNF receptor-like
F: TNFR_c6

UID:	001184760
Type:	Automatic domain
Parent:	e1sg1X3
Range:	B:114-193
Ligands:	MG
PDB:	4msv
PDB Description:	Tumor necrosis factor receptor superfamily member 6B
UniProt:	O95407
Hsap BLAST neighbor:	O95407
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4msvB5	B:33-113	EGF-like	EGF-related	TNF receptor-like
e4msvB6	B:114-193	EGF-like	EGF-related	TNF receptor-like

Domains in the same PDB:

e4msvA1	A:143-281	jelly-roll	TNF-like	TNF-like
e4msvB5	B:33-113	EGF-like	EGF-related	TNF receptor-like
e4msvB6	B:114-193	EGF-like	EGF-related	TNF receptor-like

Structural contacts of domain e4msvB6 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4msvB6	B:x,y,z->B:-X-2/3,-X+Y-1/3,-Z-1/3	EGF-related	Interaction Interface Pymol
e4msvB5	B:x,y,z->B:-X-2/3,-X+Y-1/3,-Z-1/3	EGF-related	Interaction Interface Pymol
e4msvB5	B:-X-2/3,-X+Y-1/3,-Z-1/3->B:x,y,z	EGF-related	Interaction Interface Pymol
e4msvB6	B:-X-2/3,-X+Y-1/3,-Z-1/3->B:x,y,z	EGF-related	Interaction Interface Pymol
e4msvB6	B:x,y,z->B:Y,X,-Z	EGF-related	Interaction Interface Pymol
e4msvB5	B:x,y,z->B:Y,X,-Z	EGF-related	Interaction Interface Pymol
e4msvB5	B:Y,X,-Z->B:x,y,z	EGF-related	Interaction Interface Pymol
e4msvB6	B:Y,X,-Z->B:x,y,z	EGF-related	Interaction Interface Pymol
e4msvA1	B:X,Y,Z->A:x,y,z	TNF-like	Interaction Interface Pymol
e4msvA1	B:x,y,z->A:-Y,X-Y,Z	TNF-like	Interaction Interface Pymol