Domain ID e4mtpC1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: Flavi_NS5
UID: 001126204
Type: Automatic domain
Parent: e4c11B2
Range: C:276-681
Ligands: ZN
PDB: 4mtp
PDB Description: RNA dependent RNA polymerase
UniProt: P27395
Species: Japanese encephalitis virus

Structure of domain e4mtpC1

Domains in the same chain:

e4mtpC1 C:276-681 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mtpC2 C:682-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e4mtpA1 A:276-681 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mtpA2 A:682-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mtpB1 B:276-681 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mtpB2 B:682-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mtpC1 C:276-681 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mtpC2 C:682-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e4mtpD1 D:276-447,D:480-705 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e4mtpD2 D:706-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e4mtpC1 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4mtpD1 C:x,y,z->D:-X,Y-1/2,-Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mtpA1 C:x,y,z->A:-X-1/2,-Y,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e4mtpA2 C:x,y,z->A:-X-1/2,-Y,Z-1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e4mtpB2 C:x,y,z->B:X,Y,Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol