ECOD: domain e4n3sA1

Domain ID e4n3sA1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	001312905
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:401-626
Ligands:	EDO
PDB:	4n3s
PDB Description:	Eukaryotic translation initiation factor 5B
UniProt:	P39730
Hsap BLAST neighbor:	O60841
Species:

Domain
In chain context
In PDB context

Structure of domain e4n3sA1

Domains in the same chain:

Download Pymol

e4n3sA1	A:401-626	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4n3sA2	A:627-743	cradle loop barrel	RIFT-related	Alanine racemase-C
e4n3sA3	A:744-852	Initiation factor IF2/eIF5b, domain 3	Initiation factor IF2/eIF5b, domain 3	Initiation factor IF2/eIF5b, domain 3

Domains in the same PDB:

Structural contacts of domain e4n3sA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4n3sA1	A:x,y,z->A:-Y,X-1,Z+1/4	P-loop domains-related	Interaction Interface Pymol
e4n3sA1	A:-Y,X-1,Z+1/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e4n3sB3	A:X,Y,Z->B:x,y,z	Initiation factor IF2/eIF5b, domain 3	Interaction Interface Pymol
e4n3sB2	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4n3sB3	A:-Y,X-1,Z-3/4->B:x,y,z	Initiation factor IF2/eIF5b, domain 3	Interaction Interface Pymol