Domain ID e4nbkB1

Download files:
  • A: a/b three-layered sandwiches
  • X: Caspase-like
  • H: Caspase-like
  • T: Caspase-like
  • F: Peptidase_C14
UID: 001143260
Type: Automatic domain
Parent: e1nme.1
Range: B:30-167,B:187-291
Ligands: 2J5 PO4
PDB: 4nbk
PDB Description: Caspase-6
UniProt: P55212
Hsap BLAST neighbor: P55212
Species: Homo sapiens

Structure of domain e4nbkB1

Domains in the same chain:

e4nbkB1 B:30-167,B:187-291 Caspase-like Caspase-like Caspase-like

Domains in the same PDB:

e4nbkA1 A:25-292 Caspase-like Caspase-like Caspase-like
e4nbkB1 B:30-167,B:187-291 Caspase-like Caspase-like Caspase-like

Structural contacts of domain e4nbkB1 of H-group "Caspase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nbkA1 B:x,y,z->A:X,Y,Z Caspase-like Interaction Interface Pymol
e4nbkA1 B:x,y,z->A:-Y+1/2,X+1/2,Z-1/4 Caspase-like Interaction Interface Pymol
e4nbkA1 B:x,y,z->A:Y,X,-Z Caspase-like Interaction Interface Pymol
e4nbkB1 B:x,y,z->B:Y,X,-Z+1 Caspase-like Interaction Interface Pymol
e4nbkB1 B:Y,X,-Z+1->B:x,y,z Caspase-like Interaction Interface Pymol
e4nbkB1 B:x,y,z->B:Y,X,-Z Caspase-like Interaction Interface Pymol
e4nbkB1 B:Y,X,-Z->B:x,y,z Caspase-like Interaction Interface Pymol
e4nbkA1 B:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 Caspase-like Interaction Interface Pymol
e4nbkB1 B:x,y,z->B:-Y+1/2,X+1/2,Z-1/4 Caspase-like Interaction Interface Pymol
e4nbkB1 B:-Y+1/2,X+1/2,Z-1/4->B:x,y,z Caspase-like Interaction Interface Pymol
e4nbkA1 B:-X+1/2,Y-1/2,-Z-1/4->A:x,y,z Caspase-like Interaction Interface Pymol