Domain ID e4nd7A1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 001147635
Type: Automatic domain
Parent: e1j1uA1
Range: A:1-310
Ligands: BME NA
PDB: 4nd7
PDB Description: Tyrosine--tRNA ligase
UniProt: Q57834
Hsap BLAST neighbor: P54577
Species:

Structure of domain e4nd7A1

Domains in the same chain:

e4nd7A1 A:1-310 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e4nd7A1 A:1-310 HUP domain-like HUP domains HUP domains

Structural contacts of domain e4nd7A1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nd7A1 A:x,y,z->A:-Y+1,-X+1,-Z-1/2 HUP domains Interaction Interface Pymol
e4nd7A1 A:-Y+1,-X+1,-Z-1/2->A:x,y,z HUP domains Interaction Interface Pymol
e4nd7A1 A:x,y,z->A:-Y+1,-X+1,-Z+1/2 HUP domains Interaction Interface Pymol
e4nd7A1 A:-Y+1,-X+1,-Z+1/2->A:x,y,z HUP domains Interaction Interface Pymol
e4nd7A1 A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4 HUP domains Interaction Interface Pymol
e4nd7A1 A:-Y+3/2,X-1/2,Z-1/4->A:x,y,z HUP domains Interaction Interface Pymol
e4nd7A1 A:x,y,z->A:-Y+3/2,X-1/2,Z+3/4 HUP domains Interaction Interface Pymol
e4nd7A1 A:-Y+3/2,X-1/2,Z+3/4->A:x,y,z HUP domains Interaction Interface Pymol
e4nd7A1 A:x,y,z->A:-X+3/2,Y-1/2,-Z-1/4 HUP domains Interaction Interface Pymol
e4nd7A1 A:-X+3/2,Y-1/2,-Z-1/4->A:x,y,z HUP domains Interaction Interface Pymol