Domain ID e4ndnD3

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  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: S-adenosylmethionine synthetase
  • T: S-adenosylmethionine synthetase
  • F: S-AdoMet_synt_N
UID: 001314040
Type: Automatic domain
Parent: e2p02A1
Range: D:14-125
PDB: 4ndn
PDB Description: S-adenosylmethionine synthase isoform type-2
UniProt: P31153
Hsap BLAST neighbor: P31153
Species: Homo sapiens

Structure of domain e4ndnD3

Domains in the same chain:

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e4ndnD3 D:14-125 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnD2 D:126-251 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnD1 D:252-395 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase

Domains in the same PDB:

e4ndnA3 A:15-115 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnA2 A:135-251 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnA1 A:252-395 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnB3 B:13-125 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnB2 B:126-251 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnB1 B:252-395 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnC3 C:15-113 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnC2 C:135-251 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnC1 C:252-395 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnD3 D:14-125 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnD2 D:126-251 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnD1 D:252-395 Alpha-lytic protease prodomain-like S-adenosylmethionine synthetase S-adenosylmethionine synthetase
e4ndnE1 E:15-323 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e4ndnF1 F:15-323 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains

Structural contacts of domain e4ndnD3 of H-group "S-adenosylmethionine synthetase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ndnC3 D:x,y,z->C:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnC2 D:x,y,z->C:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnC1 D:x,y,z->C:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnE1 D:X,Y,Z->E:x,y,z Rossmann-related Interaction Interface Pymol
e4ndnA1 D:x,y,z->A:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnA3 D:x,y,z->A:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnB3 D:x,y,z->B:X,Y,Z S-adenosylmethionine synthetase Interaction Interface Pymol
e4ndnA2 D:x,y,z->A:-X,Y-1/2,-Z-1/2 S-adenosylmethionine synthetase Interaction Interface Pymol