Domain ID e4ndzD1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Sulfotransfer_2
UID: 001147642
Type: Automatic domain
Parent: e3f5fA1
Range: D:368-1355
Ligands: A3P NPO
PDB: 4ndz
PDB Description: Maltose-binding periplasmic protein, Heparan sulfate 2-O-sulfotransferase 1 fusion
UniProt: Q76KB1
Hsap BLAST neighbor: Q7LGA3
Species: Gallus gallus

Structure of domain e4ndzD1

Domains in the same chain:

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e4ndzD2 D:1-370 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzD1 D:368-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4ndzA1 A:1069-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ndzB2 B:1-370 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzB1 B:368-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ndzC3 C:1-112 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzC2 C:102-369 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzC1 C:368-1356 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ndzD2 D:1-370 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzD1 D:368-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ndzE2 E:1-370 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzE1 E:368-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ndzF2 F:1-370 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4ndzF1 F:368-1355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4ndzD1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3f5fA1 D:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e4ndzE1 D:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e4ndzF1 D:X,Y,Z->F:x,y,z P-loop domains-related Interaction Interface Pymol
e4ndzB1 D:x,y,z->B:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4ndzB1 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e4ndzA1 D:-X,Y-1/2,-Z+1/2->A:x,y,z P-loop domains-related Interaction Interface Pymol