Domain ID e4nf5A2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001523429
Type: Automatic domain
Parent: e1mqiA3
Range: A:4-143,A:249-286
Ligands: GLY GOL
PDB: 4nf5
PDB Description: Glutamate receptor ionotropic, NMDA 1
UniProt: P35439
Hsap BLAST neighbor: Q05586
Species: Rattus norvegicus

Structure of domain e4nf5A2

Structural contacts of domain e4nf5A2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nf5B2 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5B1 A:X,Y,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5A2 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5A2 A:-X,Y-1/2,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5B2 A:-X+1,Y-1/2,-Z+1/2->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5B1 A:x,y,z->B:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5B1 A:x,y,z->B:-X+1/2,-Y,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4nf5B1 A:x,y,z->B:-X,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol