Domain ID e4nf8B1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Unmapped domains
UID: 001523438
Type: Automatic domain
Parent: e2a5sA2
Range: B:134-243
Ligands: GLU GLY
PDB: 4nf8
PDB Description: Glutamate receptor ionotropic, NMDA 2A
UniProt: Q00959
Hsap BLAST neighbor: Q12879
Species: Rattus norvegicus

Structure of domain e4nf8B1

Structural contacts of domain e4nf8B1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nf8A2 B:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf8B1 B:x,y,z->B:X-1/2,-Y+3/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf8B1 B:X-1/2,-Y+3/2,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e4nf8A2 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4nf8A1 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e4nf8A2 B:x,y,z->A:-X+2,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol