ECOD: domain e4nikB1

Domain ID e4nikB1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: V-set

UID:	001348834
Type:	Automatic domain
Parent:	e2ij0C1
Range:	B:134-244
PDB:	4nik
PDB Description:	Single-chain Fv fragment antibody
Hsap BLAST neighbor:	P01705
Species:

Domain
In chain context
In PDB context

Structure of domain e4nikB1

Domains in the same chain:

Download Pymol

e4nikB2	B:3-119	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nikB1	B:134-244	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4nikA1	A:3-226	Repetitive alpha hairpins	Ankyrin repeat	Ankyrin repeat
e4nikB2	B:3-119	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nikB1	B:134-244	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4nikB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4nikA1	B:x,y,z->A:X,Y,Z	Ankyrin repeat	Interaction Interface Pymol
e4nikA1	B:-Y+1,X-Y+1,Z-1/3->A:x,y,z	Ankyrin repeat	Interaction Interface Pymol