Domain ID e4npqJ1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Nicotinic receptor ligand binding domain-like
  • T: Nicotinic receptor ligand binding domain-like
  • F: Neur_chan_LBD
UID: 001126407
Type: Automatic domain
Parent: e1uw6A1
Range: J:5-183
PDB: 4npq
PDB Description: Proton-gated ion channel
UniProt: Q7NDN8
Hsap BLAST neighbor: Q9UN88
Species:

Structure of domain e4npqJ1

Domains in the same chain:

Download Pymol

e4npqJ1 J:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqJ2 J:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e4npqA1 A:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqA2 A:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqB1 B:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqB2 B:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqC1 C:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqC2 C:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqD1 D:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqD2 D:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqE1 E:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqE2 E:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqF1 F:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqF2 F:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqG1 G:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqG2 G:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqH3 H:5-192 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqH4 H:193-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqI3 I:5-192 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqI4 I:193-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqJ1 J:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqJ2 J:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqK3 K:5-192 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqK4 K:193-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqL3 L:5-192 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqL4 L:193-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqM3 M:5-192 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqM4 M:193-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqN1 N:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqN2 N:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqO1 O:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqO2 O:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqP1 P:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqP2 P:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqQ1 Q:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqQ2 Q:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqR1 R:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqR2 R:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqS1 S:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqS2 S:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e4npqT1 T:5-183 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e4npqT2 T:182-315 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Structural contacts of domain e4npqJ1 of H-group "Nicotinic receptor ligand binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4npqF1 J:x,y,z->F:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e4npqF2 J:x,y,z->F:X,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e4npqI3 J:x,y,z->I:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol