ECOD: domain e4nzrM1

Domain ID e4nzrM1

A: beta duplicates or obligate multimers
X: Single-stranded right-handed beta-helix
H: Protein M antibody-binding region
T: Protein M antibody-binding region
F: M_large_dom,M_smaller_dom

UID:	001144800
Type:	Manual and representative domain
Range:	M:78-468
Ligands:	GOL
PDB:	4nzr
PDB Description:	PROTEIN M TD
UniProt:	P47523
Species:

Domain
In chain context
In PDB context

Structure of domain e4nzrM1

Domains in the same chain:

Download Pymol

e4nzrM1	M:78-468	Single-stranded right-handed beta-helix	Protein M antibody-binding region	Protein M antibody-binding region

Domains in the same PDB:

e4nzrH2	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nzrH1	H:114-228	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nzrL2	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nzrL1	L:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4nzrM1	M:78-468	Single-stranded right-handed beta-helix	Protein M antibody-binding region	Protein M antibody-binding region

Structural contacts of domain e4nzrM1 of H-group "Protein M antibody-binding region":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4nzrL2	M:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrL1	M:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH1	M:X-1/2,-Y+3/2,-Z+1->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH2	M:X-1/2,-Y+3/2,-Z+1->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH2	M:X,Y,Z->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH1	M:X,Y,Z->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrM1	M:x,y,z->M:X-1/2,-Y+1/2,-Z+1	Protein M antibody-binding region	Interaction Interface Pymol
e4nzrM1	M:X-1/2,-Y+1/2,-Z+1->M:x,y,z	Protein M antibody-binding region	Interaction Interface Pymol
e4nzrM1	M:x,y,z->M:X-1,Y,Z	Protein M antibody-binding region	Interaction Interface Pymol
e4nzrM1	M:X-1,Y,Z->M:x,y,z	Protein M antibody-binding region	Interaction Interface Pymol
e4nzrH2	M:x,y,z->H:-X+1,Y-1/2,-Z+3/2	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH2	M:X-1,Y,Z->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e4nzrL1	M:x,y,z->L:-X+3/2,-Y+1,Z-1/2	Immunoglobulin-related	Interaction Interface Pymol
e4nzrL1	M:x,y,z->L:-X+2,Y-1/2,-Z+3/2	Immunoglobulin-related	Interaction Interface Pymol
e4nzrH1	M:x,y,z->H:X-1/2,-Y+3/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol