ECOD: domain e4o2bD2

Domain ID e4o2bD2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: Tubulin nucleotide-binding domain-like
F: Tubulin

UID:	001283324
Type:	Automatic domain
Parent:	e2btoA2
Range:	D:1-245
Ligands:	GDP GOL LOC MG
PDB:	4o2b
PDB Description:	TUBULIN BETA-2B CHAIN
UniProt:	Q6B856
Hsap BLAST neighbor:	Q9BVA1
Species:	Bos taurus

Domains in the same chain:

Download Pymol

e4o2bD2	D:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4o2bD1	D:246-441	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like

Domains in the same PDB:

e4o2bA2	A:1-242	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4o2bA1	A:243-439	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4o2bB2	B:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4o2bB1	B:246-438	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4o2bC2	C:1-244	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4o2bC1	C:245-440	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4o2bD2	D:1-245	Rossmann-like	Rossmann-related	Tubulin nucleotide-binding domain-like
e4o2bD1	D:246-441	Bacillus chorismate mutase-like	Tubulin C-terminal domain-like	Tubulin C-terminal domain-like
e4o2bE1	E:6-141	Stathmin	Stathmin	Stathmin
e4o2bF1	F:1-102,F:125-378	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Structural contacts of domain e4o2bD2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4o2bC2	D:x,y,z->C:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e4o2bF1	D:x,y,z->F:-X,Y-1/2,-Z+1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4o2bE1	D:X,Y,Z->E:x,y,z	Stathmin	Interaction Interface Pymol
e4o2bB1	D:X-1/2,-Y+1/2,-Z->B:x,y,z	Tubulin C-terminal domain-like	Interaction Interface Pymol
e4o2bE1	D:x,y,z->E:X-1/2,-Y+1/2,-Z	Stathmin	Interaction Interface Pymol