ECOD: domain e4o7mD1

Domain ID e4o7mD1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: DctP

UID:	001874233
Type:	Automatic domain
Parent:	e3gyyA2
Range:	D:153-241
Ligands:	LMR
PDB:	4o7m
PDB Description:	TRAP dicarboxylate transporter, DctP subunit
UniProt:	A3QCW5
Species:

Domain
In chain context
In PDB context

Structure of domain e4o7mD1

Domains in the same chain:

Download Pymol

e4o7mD2	D:33-152,D:242-335	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mD1	D:153-241	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e4o7mA1	A:33-152,A:242-336	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mA2	A:153-241	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mB2	B:32-152,B:242-336	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mB1	B:153-241	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mC1	C:32-152,C:242-314	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mC2	C:153-241	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mD2	D:33-152,D:242-335	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e4o7mD1	D:153-241	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e4o7mD1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4o7mA1	D:x,y,z->A:-X+2,Y-1/2,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e4o7mC1	D:x,y,z->C:X,Y,Z-1	Periplasmic binding protein-like II	Interaction Interface Pymol