ECOD: domain e4o8wD1

Domain ID e4o8wD1

A: alpha duplicates or obligate multimers
X: Spore germination protein GerD
H: Spore germination protein GerD
T: Spore germination protein GerD
F: GerD

UID:	001147687
Type:	Manual and representative domain
Range:	D:60-179
PDB:	4o8w
PDB Description:	Spore germination protein
In assembly with:	e4o8wE1 e4o8wF1
UniProt:	Q5L3Q1
Species:

Domains in the same chain:

Download Pymol

e4o8wD1	D:60-179	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD

Domains in the same PDB:

Structural contacts of domain e4o8wD1 of H-group "Spore germination protein GerD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4o8wF1	D:x,y,z->F:X,Y,Z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wE1	D:X,Y,Z->E:x,y,z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wC1	D:X,Y,Z->C:x,y,z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wB1	D:X-1/2,-Y-1/2,-Z->B:x,y,z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wC1	D:X-1/2,-Y-1/2,-Z->C:x,y,z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wF1	D:x,y,z->F:X-1/2,-Y-1/2,-Z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wB1	D:x,y,z->B:X,Y,Z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wF1	D:X-1/2,-Y-1/2,-Z->F:x,y,z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wE1	D:x,y,z->E:X-1/2,-Y-1/2,-Z	Spore germination protein GerD	Interaction Interface Pymol
e4o8wA1	D:X-1/2,-Y-1/2,-Z->A:x,y,z	Spore germination protein GerD	Interaction Interface Pymol

e4o8wA1	A:69-178	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD
e4o8wB1	B:63-179	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD
e4o8wC1	C:64-176	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD
e4o8wD1	D:60-179	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD
e4o8wE1	E:61-175	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD
e4o8wF1	F:66-180	Spore germination protein GerD	Spore germination protein GerD	Spore germination protein GerD