Domain ID e4oc6B1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: Asp
UID: 001322884
Type: Automatic domain
Parent: e3qvcA1
Range: B:106-348
Ligands: 2S1 GOL NAG
PDB: 4oc6
PDB Description: Cathepsin D heavy chain
UniProt: P07339
Hsap BLAST neighbor: P07339
Species: Homo sapiens

Structure of domain e4oc6B1

Structural contacts of domain e4oc6B1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4oc6A1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e4oc6A1 B:x,y,z->A:X,X-Y+1,-Z+1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:x,y,z->B:X-Y,-Y+1,-Z RIFT-related Interaction Interface Pymol
e4oc6B1 B:X-Y,-Y+1,-Z->B:x,y,z RIFT-related Interaction Interface Pymol
e4oc6A1 B:X-Y+1,X,Z+1/6->A:x,y,z RIFT-related Interaction Interface Pymol
e4oc6B1 B:x,y,z->B:X,X-Y+1,-Z+1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:X,X-Y+1,-Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e4oc6B1 B:x,y,z->B:X,X-Y,-Z+1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:X,X-Y,-Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e4oc6A1 B:x,y,z->A:X,X-Y,-Z+1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:x,y,z->B:-Y+1,-X+1,-Z-1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:-Y+1,-X+1,-Z-1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e4oc6B1 B:x,y,z->B:X-Y+1,X,Z+1/6 RIFT-related Interaction Interface Pymol
e4oc6B1 B:X-Y+1,X,Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol