Domain ID e4ofyB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: I-set
UID: 001770253
Type: Automatic domain
Parent: e1vcaA2
Range: B:21-128
Ligands: NAG
PDB: 4ofy
PDB Description: PROTEIN SYG-1, ISOFORM B
UniProt: B1Q236
Hsap BLAST neighbor: Q96J84
Species: Caenorhabditis elegans

Structure of domain e4ofyB1

Domains in the same chain:

e4ofyB1 B:21-128 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyB2 B:129-194,B:221-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4ofyA1 A:21-128 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyA2 A:129-194,A:221-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyB1 B:21-128 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyB2 B:129-194,B:221-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyC1 C:21-128 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyC2 C:129-194,C:221-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyD4 D:20-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyD2 D:125-241 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyD1 D:242-323 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyD3 D:324-429 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyE3 E:20-230 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyE1 E:231-328 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyE2 E:329-429 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyF1 F:20-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyF3 F:122-231 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyF2 F:232-328 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4ofyF4 F:329-429 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4ofyB1 of H-group "Immunoglobulin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ofyE3 B:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4ofyE2 B:x,y,z->E:X-1/2,Y-1/2,Z-1 Immunoglobulin-related Interaction Interface Pymol
e4ofyD3 B:X-1/2,Y+1/2,Z-2->D:x,y,z Immunoglobulin-related Interaction Interface Pymol