Domain ID e4okdB3

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Alpha-amylase
UID: 001299754
Type: Automatic domain
Parent: e1e43A2
Range: B:243-749
Ligands: GLC
PDB: 4okd
PDB Description: Isoamylase
UniProt: Q7X8Q2
Hsap BLAST neighbor: Q04446
Species: Chlamydomonas reinhardtii

Structure of domain e4okdB3

Structural contacts of domain e4okdB3 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4okdA2 B:x,y,z->A:X,Y,Z Glycosyl hydrolase domain Interaction Interface Pymol
e4okdA3 B:x,y,z->A:-Y+1/2,X+1/2,Z+1/4 TIM barrels Interaction Interface Pymol
e4okdB3 B:x,y,z->B:X-1/2,-Y+1/2,-Z+3/4 TIM barrels Interaction Interface Pymol
e4okdB3 B:X-1/2,-Y+1/2,-Z+3/4->B:x,y,z TIM barrels Interaction Interface Pymol
e4okdA1 B:x,y,z->A:-Y+1/2,X-1/2,Z+1/4 Immunoglobulin-related Interaction Interface Pymol