Domain ID e4oziD1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001285823
Type: Automatic domain
Parent: e1k5nB1
Range: D:93-190
Ligands: CA
PDB: 4ozi
PDB Description: HLA class II histocompatibility antigen, DQ beta 1 chain
UniProt: Q5Y7D3
Hsap BLAST neighbor: P01920
Species: Homo sapiens

Structure of domain e4oziD1

Domains in the same chain:

e4oziD2 D:3-92 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4oziD1 D:93-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4oziA1 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4oziA2 A:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziB2 B:3-92 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4oziB1 B:93-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziC1 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4oziC2 C:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziD2 D:3-92 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4oziD1 D:93-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziE2 E:3-134 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziE1 E:135-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziF2 F:2-129 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziF1 F:130-254 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziG2 G:3-134 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziG1 G:135-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziH2 H:2-129 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4oziH1 H:130-254 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4oziD1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4oziC1 D:x,y,z->C:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e4oziC2 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e4oziB1 D:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol