Domain ID e4p0sB1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: EME1-MUS81_C
UID: 001293937
Type: Automatic domain
Parent: e2ziuA8
Range: B:427-566
PDB: 4p0s
PDB Description: Crossover junction endonuclease EME1
UniProt: Q96AY2
Hsap BLAST neighbor: Q96AY2
Species: Homo sapiens

Structure of domain e4p0sB1

Domains in the same chain:

e4p0sB2 B:233-370,B:403-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sB1 B:427-566 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Domains in the same PDB:

e4p0sA2 A:256-452 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sA1 A:453-551 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sB2 B:233-370,B:403-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sB1 B:427-566 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sC2 C:256-452 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sC1 C:453-551 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sD2 D:233-370,D:403-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sD1 D:427-566 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sE2 E:256-452 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sE1 E:453-551 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sF2 F:233-370,F:403-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sF1 F:427-566 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sG2 G:256-452 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sG1 G:453-551 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4p0sH2 H:233-370,H:403-426 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e4p0sH1 H:427-566 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Structural contacts of domain e4p0sB1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p0sA1 B:x,y,z->A:X,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e4p0sA2 B:x,y,z->A:X,Y,Z Restriction endonuclease-like Interaction Interface Pymol
e4p0sG2 B:X-1/2,Y+1/2,Z->G:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e4p0sH2 B:X-1/2,Y+1/2,Z->H:x,y,z Restriction endonuclease-like Interaction Interface Pymol