Domain ID e4p2rP1

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  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 001293154
Type: Automatic domain
Parent: e1hdmA2
Range: P:2-81
PDB: 4p2r
PDB Description: H-2 class II histocompatibility antigen, E-K alpha chain
UniProt: P04224
Hsap BLAST neighbor: P01903
Species: Mus musculus

Structure of domain e4p2rP1

Domains in the same chain:

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e4p2rP1 P:2-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rP2 P:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4p2rA1 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rA2 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rB2 B:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rB1 B:93-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rD2 D:0-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rD1 D:108-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rE1 E:0-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rE2 E:119-244 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rF1 F:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rF2 F:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rG2 G:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rG1 G:93-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rI2 I:0-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rI1 I:108-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rJ1 J:0-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rJ2 J:119-244 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rK1 K:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rK2 K:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rL2 L:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rL1 L:93-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rN2 N:0-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rN1 N:108-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rO1 O:3-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rO2 O:119-244 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rP1 P:2-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rP2 P:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rQ2 Q:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p2rQ1 Q:93-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rS2 S:0-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rS1 S:108-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rT1 T:3-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p2rT2 T:119-244 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4p2rP1 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 P:X,Y,Z->Q:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e4p2rQ1 P:X,Y,Z->Q:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4p2rS2 P:X,Y,Z->S:x,y,z Immunoglobulin-related Interaction Interface Pymol