Domain ID e4p4kE1

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 001314132
Type: Automatic domain
Parent: e1hdmA2
Range: E:1-81
PDB: 4p4k
PDB Description: HLA class II histocompatibility antigen, DP alpha 1 chain
UniProt: P20036
Hsap BLAST neighbor: P20036
Species: Homo sapiens

Structure of domain e4p4kE1

Domains in the same chain:

e4p4kE1 E:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p4kE2 E:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4p4kA1 A:2-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p4kA2 A:82-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kB2 B:-25-89 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p4kB1 B:91-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kC2 C:2-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kC1 C:117-205 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kD1 D:3-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kD2 D:115-243 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kE1 E:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p4kE2 E:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kF2 F:-25-89 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e4p4kF1 F:92-189 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kG2 G:3-116 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kG1 G:117-205 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kH1 H:3-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4p4kH2 H:115-241 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4p4kE1 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p4kF1 E:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4p4kF1 E:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4p4kH1 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e4p4kG2 E:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol