Domain ID e4p4mA2

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 001320052
Type: Automatic domain
Parent: e2fmpA3
Range: A:145-376
Ligands: D3T MG
PDB: 4p4m
PDB Description: DNA polymerase beta
UniProt: Q9U6N3
Hsap BLAST neighbor: P06746
Species: Leishmania infantum

Structure of domain e4p4mA2

Structural contacts of domain e4p4mA2 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4p4mA2 A:x,y,z->A:X,X-Y-1,-Z-1/6 Nucleotidyltransferase Interaction Interface Pymol
e4p4mA2 A:X,X-Y-1,-Z-1/6->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e4p4mA2 A:x,y,z->A:X-Y,X,Z-1/6 Nucleotidyltransferase Interaction Interface Pymol
e4p4mA1 A:x,y,z->A:X-Y,X,Z-1/6 SAM/DNA-glycosylase Interaction Interface Pymol
e4p4mA2 A:X-Y,X,Z-1/6->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e4p4mA2 A:x,y,z->A:Y,X,-Z-1/3 Nucleotidyltransferase Interaction Interface Pymol
e4p4mA2 A:Y,X,-Z-1/3->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol